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SilkSatDb: The First Comprehensive Database on Insect Microsatellites

 
Silkworm Biology















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LIST OF PUBLICATIONS

  1. Mita,K., Kasahara,M., Sasaki,S., Nagayasu,Y., Yamada,T., Kanamori,H., Namiki,N., Kitagawa,M., Yamashita,H., Yasukochi,Y.et al. (2004) The Genome Sequence of Silkworm, Bombyx mori. DNA Res., 11, 27-35

  2. Sreenu,V.B., Ranjitkumar,G., Swaminathan,S., Priya,S., Bose,B., Pavan,M.N., Geetha Thanu, Nagaraju,J. and Nagarajaram,H.A. (2003) MICAS: A fully automated web server for microsatellite extraction and analysis from prokaryote and viral genomic sequences. Applied Bioinformatics, 2, 165-168.

  3. Sreenu,V.B., Vishwanath,A., Nagaraju,J. and Nagarajaram,H.A. (2003) MICdb: Database of prokaryotic microsatellites. Nucleic Acids Res., 31, 106-108.

  4. Mita,K., Morimyo,M., Okano,K., Koike,Y., Nohata,J., Kawasaki,H., Kadono-Okuda, K.,Yamamoto,K., Suzuki,M.G., Shimada,T. et al. (2003) The construction of an EST database for Bombyx mori and its application. Proc. Natl. Acad. Sci. USA., 100, 14121-14126.

  5. Nagaraju,J. (2002) Application of genetic principles for improving silk production. Curr. Sci., 83, 409-414.

  6. Nagaraju,J. and Goldsmith,M.R. (2002) Silkworm genomics - progress and prospects. Curr. Sci.,  83, 415-425.

  7. Nagaraju,J., Kathirvel,M., Subbiah,E.V. Muthulakshmi,M. and Kumar,L.D. (2002) FISSR-PCR : a simple and sensitive assay for highthroughput genotyping and genetic mapping. Mol. Cell. Probes, 16, 67-72.

  8. Nagaraju, J., Reddy, K.D., Nagaraja, G.M., Sethuraman, B.N. (2001) Comparison of multilocus RFLPs and PCR-based marker systems for genetic analysis of the silkworm, Bombyx mori. Heredity, 86, 588-597.

  9. Nagaraju,J. (2000) Recent advances in molecular genetics of the silk moth, Bombyx Mori. Curr. Sci., 78, 746-747.

  10. Nagaraju,J., Klimenko,V. and Couble,P. (2000) The silkworm Bombyx mori, a model genetic system. In: Encyclopedia of Genetics (ed Reeves, E.) (Fitzroy Dearborn, London, UK) P:219-239

  11. Reddy,K.D., Abraham,E.G. and Nagaraju,J.(1999) Genetic characterization of the silkworm, Bombyx mori by inter-simple sequence repeat (ISSR) - anchored PCR. Heredity,  83, 681-687.

  12. Reddy,K.D., Abraham,E.G. and Nagaraju,J. (1999) Microsatellites of the silkworm, Bombyx mori: abundance, polymorphism and strain characterization. Genome, 42, 1057-1065.

  13. Sharma,A., Niphadkar,M.P., Kathirvelu,P., Nagaraju,J. and Singh,L. (1999) DNA fingerprinting variability within and among the silkworm Bombyx mori genotypes and estimation of their genetic relatedness using Bkm-derived probe J. Heredity, (USA) 90, 315-319.

  14. Nagaraju,J. and Singh,L. (1997) Assessment of genetic diversity by DNA profiling and its significance in silkworm, Bombyx mori , Electrophoresis, 18, 1676-1681.

  15. Nagaraju,J. and Pavan Kumar,T. (1995) Effect of selection of cocoon filament length in divergently selected lines of the silkworm, Bombyx mori. J. Sericult. Sci. Japan, 64, 103-109.

  16. Prasad,M.D., Muthulakshmi,M., Madhu,M., Archak,S., Mita,K. and Nagaraju,J. (2004) Survey and analysis of microsatellites in the silkworm, Bombyx mori: frequency, distribution, mutations, marker potential and their conservation in heterologous species. Genetics, doi:10.1534/genetics.104.031005.

  17. Xia,Q., Zhou,Z., Lu,C., Cheng,D., Dai,F., Li,B., Zhao,P., Zha,X., Cheng,T., Chai,C., et al. (2004) A draft sequence for the genome of the domesticated silkworm (Bombyx mori) Science. 306:1937-1940.

  18. Wang,J., Xia,Q., He,X., Dai,M., Ruan,J., Chen,J., Yu,G., Yuan,H., Hu,Y., Li,R., et al. (2005) SilkDB: a knowledgebase for silkworm biology and genomics. Nucleic Acids Res. 33: D399-D402.
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