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SilkSatDb: The First Comprehensive Database on Insect Microsatellites

 
Silkworm Biology















cDNA Library Explanation

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cDNA libraries of Bombyx mori for the EST database

The first 4 letters of the clone name define the cDNA library from which the cDNA clone was derived.

Library name

Strain/Race

Organ/Tissue

Developmental stage

Sex

Cloning vector and method

Sequence direction

N---

BmN cultured cell

cultured cell (derived from ovary)

normal

Uni-directional

sequenced from T3 primer (5' -> 3')

NV02

BmN cultured cell

cultured cell (derived from ovary)

BmNPV infected; 2 hr after inoculation

Uni-directional

sequenced from T3 primer (5' -> 3')

NV06

BmN cultured cell

cultured cell (derived from ovary)

BmNPV infected; 6 hr after inoculation

Uni-directional

sequenced from T3 primer (5' -> 3')

NV12

BmN cultured cell

cultured cell (derived from ovary)

BmNPV infected; 12 hr after inoculation

Uni-directional

sequenced from T3 primer (5' -> 3')

br--

Strain Daizo

Brain

P0 (just after pupation)

female/male mixed

Uni-directional

sequenced from T3 primer (5' -> 3')

ce--

Strain C202 x J201

Compound eye

S1 - P3 mixed

female/male mixed

Uni-directional

sequenced from T3 primer (5' -> 3')

e40h

Strain p50

Diapause-destined embryo

40 hr after oviposition

female/male mixed

Uni-directional

sequenced from T3 primer (5' -> 3')

e96h

Strain p50

Diapause-cancelled embryo

76 hr after HCl treatment (HCl at 20 hr after oviposition)

female/male mixed

Uni-directional

sequenced from T3 primer (5' -> 3')

fbVf

Strain p50

fat body

5th-instar day-3 larva

female

cloned into pUC18 SmaI

sequenced from M4 primer (direction unknown)

fbVm

Strain p50

fat body

5th-instar day-3 larva

male

cloned into pUC18 SmaI

sequenced from M4 primer (direction unknown)

fbS2

Strain C202 x J201

fat body

S0 (Spinning day 2)

male

Uni-directional

sequenced from T3 primer (5' -> 3')

fbpv

Strain Shuko x Ryuhaku

fat body

P0 (just after pupation); BmNPV infected; 3 hr after inoculation

female/male mixed

Uni-directional

sequenced from T3 primer (5' -> 3')

heS0

Strain C108

Hemocyte

Spinning stage day-0

female/male mixed

Uni-directional

sequenced from T3 primer (5' -> 3')

heS3

Strain C108

Hemocyte

Spinning stage day-3

female/male mixed

Uni-directional

sequenced from T3 primer (5' -> 3')

mg--

Strain p50

Midgut

5th-instar day-4 larva

female/male mixed

Uni-directional

sequenced from T3 primer (5' -> 3')

msgV

donated by Dr. Sehnal, Czech

Middle silkgland

5th-instar larva

female/male mixed

Uni-directional

sequenced from T3 primer (5' -> 3')

pg--

Strain Shuko x Ryuhaku

Pheromone gland

Newly-eclosed adult

female

Uni-directional

sequenced from T3 primer (5' -> 3')

prgv

Strain p50

Prothoracic gland

5th-instar day-4 larva

female/male mixed

Uni-directional

sequenced from T3 primer (5' -> 3')

ps4M

Strain p50

Posterior silkgland

4th molting stage

female/male mixed

Uni-directional

sequenced from T3 primer (5' -> 3')

psV3

Strain p50

Posterior silkgland

5th-instar day-3 larva

female/male mixed

Uni-directional

sequenced from T3 primer (5' -> 3')

tesV

Strain p50

testis

5th-instar day-3 larva

male

Uni-directional

sequenced from T3 primer (5' -> 3')

tesS

Strain p50

testis

Spinning stage day-3

male

Uni-directional

sequenced from T3 primer (5' -> 3')

wdV1

Strain C108

Wing disk

5th-instar day-1 larva

female/male mixed

Uni-directional

sequenced from T3 primer (5' -> 3')

wdV3

Strain C108

Wing disk

5th-instar day-3 larva

female/male mixed

Uni-directional

sequenced from T3 primer (5' -> 3')

wdV4

Strain C108

Wing disk

5th-instar day-4 larva

female/male mixed

Uni-directional

sequenced from T3 primer (5' -> 3')

wdS0

Strain C108

Wing disk

spinning stage day-0

female/male mixed

Uni-directional

sequenced from T3 primer (5' -> 3')

wdS2

Strain C108

Wing disk

spinning stage day-2

female/male mixed

Uni-directional

sequenced from T3 primer (5' -> 3')

wdS3

Strain C108

Wing disk

spinning stage day-3

female/male mixed

Uni-directional

sequenced from T3 primer (5' -> 3')


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